Package: RootscanR 0.0.1

RootscanR: Stitching and Analyzing Root Scans

Minirhizotrons are widely used to observe and explore roots and their growth. This package provides the means to stitch images and divide them into depth layers. Please note that this R package was developed alongside the following manuscript: Stitching root scans and extracting depth layer information -- a workflow and practical examples, S. Kersting, L. Knüver, and M. Fischer. The manuscript is currently in preparation and should be citet as soon as it is available. This project was supported by the project ArtIGROW, which is a part of the WIR!-Alliance ArtIFARM – Artificial Intelligence in Farming funded by the German Federal Ministry of Research, Technology and Space (No. 03WIR4805).

Authors:Sophie Kersting [aut, cre], Linda Knüver [aut], Mareike Fischer [aut]

RootscanR_0.0.1.tar.gz
RootscanR_0.0.1.zip(r-4.7)RootscanR_0.0.1.zip(r-4.6)RootscanR_0.0.1.zip(r-4.5)
RootscanR_0.0.1.tgz(r-4.6-any)RootscanR_0.0.1.tgz(r-4.5-any)
RootscanR_0.0.1.tar.gz(r-4.7-any)RootscanR_0.0.1.tar.gz(r-4.6-any)
RootscanR_0.0.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
RootscanR/json (API)

# Install 'RootscanR' in R:
install.packages('RootscanR', repos = c('https://sophiekersting.r-universe.dev', 'https://cloud.r-project.org'))

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.00 score 4 scripts 111 downloads 24 exports 10 dependencies

Last updated from:170219ad82. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK110
source / vignettesOK139
linux-release-x86_64OK113
macos-release-arm64OK97
macos-oldrel-arm64OK110
windows-develOK66
windows-releaseOK63
windows-oldrelOK70
wasm-releaseOK89

Exports:applyImgMaskblendImgscheckInputcm2pxcombineStatsWithDLcreateDepthLayerMasksdissectionLinefindAvgOverlapfindAvgSurfacefindOverlapfindSurfacegetDepthLayerInfogetDepthLayerInfo_pargetNeighborCoordsgetOverviewInputimageCorrkimuraLengthppcm2ppippi2ppcmpx2cmshowImgMaskskelPxWidthsplitImgHorizstitchImgs

Dependencies:abindcligluelifecyclemagrittrpngrlangstringistringrvctrs